Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Upk2P38575 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Upk2P38575 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.1□□□□□ -0.31
Upk2P38575 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 Gm27741-201ENSMUST00000185060 237 ntBASIC13.1□□□□□ -0.31
Upk2P38575 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.1□□□□□ -0.31
Upk2P38575 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.1□□□□□ -0.31
Upk2P38575 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.1□□□□□ -0.31
Upk2P38575 Mzt1-203ENSMUST00000227948 952 ntBASIC13.1□□□□□ -0.31
Upk2P38575 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.1□□□□□ -0.31
Upk2P38575 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk2P38575 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Upk2P38575 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk2P38575 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.09□□□□□ -0.31
Upk2P38575 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.09□□□□□ -0.31
Upk2P38575 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Gm18733-201ENSMUST00000173950 856 ntBASIC13.09□□□□□ -0.31
Upk2P38575 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.09□□□□□ -0.31
Upk2P38575 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.09□□□□□ -0.31
Upk2P38575 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk2P38575 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Upk2P38575 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk2P38575 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Upk2P38575 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.08□□□□□ -0.31
Upk2P38575 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Upk2P38575 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Upk2P38575 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Upk2P38575 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.08□□□□□ -0.32
Upk2P38575 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.08□□□□□ -0.32
Upk2P38575 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Gm2272-201ENSMUST00000194903 582 ntBASIC13.08□□□□□ -0.32
Upk2P38575 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.08□□□□□ -0.32
Upk2P38575 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Upk2P38575 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Upk2P38575 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Upk2P38575 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.08□□□□□ -0.32
Upk2P38575 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk2P38575 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms