Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.51□□□□□ -0.25
Cd40P27512 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.51□□□□□ -0.25
Cd40P27512 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.51□□□□□ -0.25
Cd40P27512 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Gm16026-204ENSMUST00000162652 683 ntBASIC13.51□□□□□ -0.25
Cd40P27512 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Gm45747-201ENSMUST00000212203 999 ntBASIC13.51□□□□□ -0.25
Cd40P27512 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd40P27512 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cd40P27512 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cd40P27512 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.5□□□□□ -0.25
Cd40P27512 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cd40P27512 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.5□□□□□ -0.25
Cd40P27512 Gm27525-201ENSMUST00000184465 107 ntBASIC13.5□□□□□ -0.25
Cd40P27512 Gm8000-201ENSMUST00000188378 592 ntBASIC13.5□□□□□ -0.25
Cd40P27512 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.5□□□□□ -0.25
Cd40P27512 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.5□□□□□ -0.25
Cd40P27512 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.5□□□□□ -0.25
Cd40P27512 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd40P27512 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cd40P27512 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cd40P27512 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.49□□□□□ -0.25
Cd40P27512 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Cd40P27512 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cd40P27512 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.49□□□□□ -0.25
Cd40P27512 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Gm14494-201ENSMUST00000118786 435 ntBASIC13.49□□□□□ -0.25
Cd40P27512 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cd40P27512 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.49□□□□□ -0.25
Cd40P27512 Gm44492-201ENSMUST00000197012 141 ntBASIC13.49□□□□□ -0.25
Cd40P27512 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cd40P27512 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cd40P27512 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Cd40P27512 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40P27512 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cd40P27512 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cd40P27512 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cd40P27512 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cd40P27512 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms