Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Prim1P20664 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Prim1P20664 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.98■□□□□ 0.63
Prim1P20664 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Prim1P20664 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Prim1P20664 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Prim1P20664 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.98■□□□□ 0.63
Prim1P20664 Gm42660-201ENSMUST00000197733 947 ntBASIC18.98■□□□□ 0.63
Prim1P20664 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.98■□□□□ 0.63
Prim1P20664 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Prim1P20664 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.98■□□□□ 0.63
Prim1P20664 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prim1P20664 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Gm5479-201ENSMUST00000160578 435 ntBASIC18.97■□□□□ 0.63
Prim1P20664 Gm18766-201ENSMUST00000189811 808 ntBASIC18.97■□□□□ 0.63
Prim1P20664 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.97■□□□□ 0.63
Prim1P20664 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.97■□□□□ 0.63
Prim1P20664 AC132260.2-201ENSMUST00000224482 344 ntBASIC18.97■□□□□ 0.63
Prim1P20664 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.97■□□□□ 0.63
Prim1P20664 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Prim1P20664 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prim1P20664 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prim1P20664 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prim1P20664 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.96■□□□□ 0.63
Prim1P20664 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.96■□□□□ 0.63
Prim1P20664 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Gm9824-201ENSMUST00000178707 561 ntBASIC18.96■□□□□ 0.63
Prim1P20664 Gm27622-201ENSMUST00000183779 60 ntBASIC18.96■□□□□ 0.63
Prim1P20664 Gm27430-201ENSMUST00000184585 107 ntBASIC18.96■□□□□ 0.63
Prim1P20664 Gm44333-201ENSMUST00000197168 107 ntBASIC18.96■□□□□ 0.63
Prim1P20664 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prim1P20664 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Prim1P20664 Asic1-205ENSMUST00000228185 1818 ntBASIC18.95■□□□□ 0.62
Prim1P20664 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.95■□□□□ 0.62
Prim1P20664 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.95■□□□□ 0.62
Prim1P20664 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.95■□□□□ 0.62
Prim1P20664 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Prim1P20664 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.95■□□□□ 0.62
Prim1P20664 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prim1P20664 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prim1P20664 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms