Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgn1P18608 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.69□□□□□ -0.22
Hmgn1P18608 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hmgn1P18608 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgn1P18608 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn1P18608 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgn1P18608 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Gm7506-201ENSMUST00000207758 815 ntBASIC13.68□□□□□ -0.22
Hmgn1P18608 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgn1P18608 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn1P18608 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn1P18608 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.67□□□□□ -0.22
Hmgn1P18608 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Gm27867-201ENSMUST00000184778 125 ntBASIC13.67□□□□□ -0.22
Hmgn1P18608 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.67□□□□□ -0.22
Hmgn1P18608 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn1P18608 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms