Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.27■□□□□ 0.36
Usp53P15975 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp53P15975 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.27■□□□□ 0.36
Usp53P15975 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Usp53P15975 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp53P15975 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp53P15975 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp53P15975 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.27■□□□□ 0.36
Usp53P15975 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp53P15975 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp53P15975 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp53P15975 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp53P15975 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp53P15975 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
Usp53P15975 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp53P15975 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.26■□□□□ 0.35
Usp53P15975 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp53P15975 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp53P15975 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp53P15975 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp53P15975 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.26■□□□□ 0.35
Usp53P15975 Gm27920-201ENSMUST00000183953 96 ntBASIC17.26■□□□□ 0.35
Usp53P15975 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp53P15975 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.26■□□□□ 0.35
Usp53P15975 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp53P15975 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Usp53P15975 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.26■□□□□ 0.35
Usp53P15975 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp53P15975 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.26■□□□□ 0.35
Usp53P15975 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp53P15975 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Usp53P15975 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp53P15975 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Usp53P15975 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp53P15975 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp53P15975 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.25■□□□□ 0.35
Usp53P15975 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Mir449b-201ENSMUST00000104833 80 ntBASIC17.25■□□□□ 0.35
Usp53P15975 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp53P15975 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp53P15975 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp53P15975 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp53P15975 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.25■□□□□ 0.35
Usp53P15975 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp53P15975 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp53P15975 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp53P15975 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Gm2810-201ENSMUST00000118681 990 ntBASIC17.24■□□□□ 0.35
Usp53P15975 Gm11543-201ENSMUST00000120758 370 ntBASIC17.24■□□□□ 0.35
Usp53P15975 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms