Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Hoxa4P06798 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hoxa4P06798 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.68□□□□□ -0.06
Hoxa4P06798 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hoxa4P06798 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa4P06798 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.67□□□□□ -0.06
Hoxa4P06798 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm23935-201ENSMUST00000102303 57 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm24270-201ENSMUST00000102326 57 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm15483-201ENSMUST00000120338 456 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm24245-201ENSMUST00000157318 57 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm43575-201ENSMUST00000196420 516 ntBASIC14.67□□□□□ -0.06
Hoxa4P06798 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hoxa4P06798 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hoxa4P06798 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.67□□□□□ -0.06
Hoxa4P06798 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa4P06798 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm2810-201ENSMUST00000118681 990 ntBASIC14.66□□□□□ -0.06
Hoxa4P06798 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm18889-201ENSMUST00000174284 929 ntBASIC14.66□□□□□ -0.06
Hoxa4P06798 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hoxa4P06798 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa4P06798 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms