Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P04224 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
P04224 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.15□□□□□ -0.3
P04224 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.15□□□□□ -0.3
P04224 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.15□□□□□ -0.3
P04224 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P04224 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P04224 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P04224 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
P04224 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
P04224 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P04224 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.14□□□□□ -0.31
P04224 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
P04224 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.14□□□□□ -0.31
P04224 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P04224 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.14□□□□□ -0.31
P04224 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
P04224 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P04224 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
P04224 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
P04224 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
P04224 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04224 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.13□□□□□ -0.31
P04224 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
P04224 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
P04224 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P04224 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
P04224 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.13□□□□□ -0.31
P04224 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.13□□□□□ -0.31
P04224 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.13□□□□□ -0.31
P04224 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.13□□□□□ -0.31
P04224 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
P04224 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
P04224 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P04224 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.13□□□□□ -0.31
P04224 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.13□□□□□ -0.31
P04224 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.13□□□□□ -0.31
P04224 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
P04224 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
P04224 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.13□□□□□ -0.31
P04224 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
P04224 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms