Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
P01878 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P01878 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
P01878 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
P01878 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.29■□□□□ 0.04
P01878 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.29■□□□□ 0.04
P01878 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.29■□□□□ 0.04
P01878 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.29■□□□□ 0.04
P01878 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Gm46209-201ENSMUST00000217912 553 ntBASIC15.29■□□□□ 0.04
P01878 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.29■□□□□ 0.04
P01878 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.29■□□□□ 0.04
P01878 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
P01878 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.29■□□□□ 0.04
P01878 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
P01878 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.29■□□□□ 0.04
P01878 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P01878 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P01878 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01878 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
P01878 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
P01878 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01878 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
P01878 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.28■□□□□ 0.04
P01878 Gm15653-201ENSMUST00000119247 907 ntBASIC15.28■□□□□ 0.04
P01878 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.28■□□□□ 0.04
P01878 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Gm45453-201ENSMUST00000211758 853 ntBASIC15.28■□□□□ 0.04
P01878 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.28■□□□□ 0.04
P01878 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.28■□□□□ 0.04
P01878 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
P01878 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
P01878 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.28■□□□□ 0.04
P01878 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.28■□□□□ 0.04
P01878 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
P01878 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P01878 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01878 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
P01878 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01878 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01878 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01878 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.27■□□□□ 0.04
P01878 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01878 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
P01878 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.27■□□□□ 0.03
P01878 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
P01878 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
P01878 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
P01878 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.27■□□□□ 0.03
P01878 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
P01878 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01878 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01878 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01878 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01878 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P01878 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P01878 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.26■□□□□ 0.03
P01878 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P01878 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01878 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01878 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms