Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
TcraP01849 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.95□□□□□ -0.66
TcraP01849 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.94□□□□□ -0.66
TcraP01849 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
TcraP01849 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
TcraP01849 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Gm11336-201ENSMUST00000118168 334 ntBASIC10.94□□□□□ -0.66
TcraP01849 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.94□□□□□ -0.66
TcraP01849 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
TcraP01849 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Gm27389-201ENSMUST00000183622 195 ntBASIC10.94□□□□□ -0.66
TcraP01849 Mir1668-201ENSMUST00000184114 107 ntBASIC10.94□□□□□ -0.66
TcraP01849 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Gm45058-201ENSMUST00000205810 766 ntBASIC10.94□□□□□ -0.66
TcraP01849 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
TcraP01849 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
TcraP01849 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Acot6-202ENSMUST00000222921 3622 ntBASIC10.94□□□□□ -0.66
TcraP01849 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.94□□□□□ -0.66
TcraP01849 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
TcraP01849 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TcraP01849 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
TcraP01849 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.93□□□□□ -0.66
TcraP01849 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
TcraP01849 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.93□□□□□ -0.66
TcraP01849 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Gm26039-201ENSMUST00000158152 144 ntBASIC10.93□□□□□ -0.66
TcraP01849 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.93□□□□□ -0.66
TcraP01849 Gm43799-201ENSMUST00000201845 579 ntBASIC10.93□□□□□ -0.66
TcraP01849 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.93□□□□□ -0.66
TcraP01849 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
TcraP01849 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.93□□□□□ -0.66
TcraP01849 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.93□□□□□ -0.66
TcraP01849 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.93□□□□□ -0.66
TcraP01849 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TcraP01849 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms