Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm10355-201ENSMUST00000097146 517 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Efs-202ENSMUST00000227037 2540 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.6□□□□□ -0.71
Sh2d1aO88890 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.6□□□□□ -0.71
Sh2d1aO88890 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Gm6296-201ENSMUST00000222599 943 ntBASIC10.6□□□□□ -0.71
Sh2d1aO88890 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.6□□□□□ -0.71
Sh2d1aO88890 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sh2d1aO88890 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.59□□□□□ -0.71
Sh2d1aO88890 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm14722-201ENSMUST00000118943 689 ntBASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm15358-201ENSMUST00000119249 520 ntBASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm11780-201ENSMUST00000136880 516 ntBASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.59□□□□□ -0.71
Sh2d1aO88890 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sh2d1aO88890 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Sh2d1aO88890 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Sh2d1aO88890 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms