Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Slc28a2O88627 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc28a2O88627 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Gm8097-201ENSMUST00000117903 829 ntBASIC13.32□□□□□ -0.28
Slc28a2O88627 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Slc28a2O88627 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.32□□□□□ -0.28
Slc28a2O88627 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc28a2O88627 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Slc28a2O88627 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.32□□□□□ -0.28
Slc28a2O88627 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Slc28a2O88627 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc28a2O88627 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc28a2O88627 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.31□□□□□ -0.28
Slc28a2O88627 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Slc28a2O88627 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc28a2O88627 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.31□□□□□ -0.28
Slc28a2O88627 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.31□□□□□ -0.28
Slc28a2O88627 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Slc28a2O88627 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc28a2O88627 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc28a2O88627 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.31□□□□□ -0.28
Slc28a2O88627 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.3□□□□□ -0.28
Slc28a2O88627 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc28a2O88627 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc28a2O88627 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.3□□□□□ -0.28
Slc28a2O88627 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc28a2O88627 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms