Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IkbkbO88351 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.53■□□□□ 0.24
IkbkbO88351 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IkbkbO88351 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.53■□□□□ 0.24
IkbkbO88351 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.53■□□□□ 0.24
IkbkbO88351 Mir8117-201ENSMUST00000184773 107 ntBASIC16.53■□□□□ 0.24
IkbkbO88351 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.53■□□□□ 0.24
IkbkbO88351 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.53■□□□□ 0.24
IkbkbO88351 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
IkbkbO88351 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IkbkbO88351 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
IkbkbO88351 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IkbkbO88351 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.52■□□□□ 0.24
IkbkbO88351 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IkbkbO88351 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.52■□□□□ 0.24
IkbkbO88351 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.52■□□□□ 0.24
IkbkbO88351 Gm13597-201ENSMUST00000121239 375 ntBASIC16.52■□□□□ 0.24
IkbkbO88351 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Gm8318-201ENSMUST00000182954 872 ntBASIC16.52■□□□□ 0.24
IkbkbO88351 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.52■□□□□ 0.24
IkbkbO88351 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IkbkbO88351 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.52■□□□□ 0.23
IkbkbO88351 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
IkbkbO88351 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
IkbkbO88351 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IkbkbO88351 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.51■□□□□ 0.23
IkbkbO88351 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.51■□□□□ 0.23
IkbkbO88351 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IkbkbO88351 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
IkbkbO88351 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.51■□□□□ 0.23
IkbkbO88351 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
IkbkbO88351 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IkbkbO88351 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.51■□□□□ 0.23
IkbkbO88351 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IkbkbO88351 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.51■□□□□ 0.23
IkbkbO88351 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.51■□□□□ 0.23
IkbkbO88351 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
IkbkbO88351 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IkbkbO88351 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IkbkbO88351 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.5■□□□□ 0.23
IkbkbO88351 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IkbkbO88351 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IkbkbO88351 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.5■□□□□ 0.23
IkbkbO88351 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
IkbkbO88351 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IkbkbO88351 Gm25911-201ENSMUST00000157621 56 ntBASIC16.5■□□□□ 0.23
IkbkbO88351 Gm27702-201ENSMUST00000184512 56 ntBASIC16.5■□□□□ 0.23
IkbkbO88351 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IkbkbO88351 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IkbkbO88351 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms