Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.57□□□□□ -0.24
Pdlim3O70209 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.57□□□□□ -0.24
Pdlim3O70209 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim3O70209 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim3O70209 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim3O70209 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.56□□□□□ -0.24
Pdlim3O70209 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.56□□□□□ -0.24
Pdlim3O70209 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pdlim3O70209 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim3O70209 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 AA414768-201ENSMUST00000121924 1257 ntBASIC13.55□□□□□ -0.24
Pdlim3O70209 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.55□□□□□ -0.24
Pdlim3O70209 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pdlim3O70209 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim3O70209 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms