Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Mmp8O70138 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp8O70138 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.2■□□□□ 0.5
Mmp8O70138 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mmp8O70138 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Mmp8O70138 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Mmp8O70138 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Mmp8O70138 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Mmp8O70138 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.19■□□□□ 0.5
Mmp8O70138 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.19■□□□□ 0.5
Mmp8O70138 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.19■□□□□ 0.5
Mmp8O70138 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.19■□□□□ 0.5
Mmp8O70138 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.19■□□□□ 0.5
Mmp8O70138 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp8O70138 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mmp8O70138 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Mmp8O70138 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Mmp8O70138 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Mmp8O70138 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.18■□□□□ 0.5
Mmp8O70138 Gm2451-201ENSMUST00000199447 999 ntBASIC18.18■□□□□ 0.5
Mmp8O70138 Gm10290-201ENSMUST00000200451 999 ntBASIC18.18■□□□□ 0.5
Mmp8O70138 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.18■□□□□ 0.5
Mmp8O70138 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.18■□□□□ 0.5
Mmp8O70138 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.18■□□□□ 0.5
Mmp8O70138 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
Mmp8O70138 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp8O70138 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.17■□□□□ 0.5
Mmp8O70138 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.17■□□□□ 0.5
Mmp8O70138 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.17■□□□□ 0.5
Mmp8O70138 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.17■□□□□ 0.5
Mmp8O70138 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.17■□□□□ 0.5
Mmp8O70138 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mmp8O70138 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms