Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.65□□□□□ -0.22
Alx3O70137 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Gm12644-201ENSMUST00000119935 606 ntBASIC13.65□□□□□ -0.22
Alx3O70137 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.65□□□□□ -0.22
Alx3O70137 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.65□□□□□ -0.22
Alx3O70137 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.65□□□□□ -0.22
Alx3O70137 Gm18669-201ENSMUST00000216049 778 ntBASIC13.65□□□□□ -0.22
Alx3O70137 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Alx3O70137 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.65□□□□□ -0.22
Alx3O70137 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Alx3O70137 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx3O70137 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.64□□□□□ -0.23
Alx3O70137 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Alx3O70137 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Alx3O70137 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Gm8097-201ENSMUST00000117903 829 ntBASIC13.64□□□□□ -0.23
Alx3O70137 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.64□□□□□ -0.23
Alx3O70137 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Alx3O70137 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Alx3O70137 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Alx3O70137 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx3O70137 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx3O70137 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.63□□□□□ -0.23
Alx3O70137 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Alx3O70137 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Alx3O70137 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Gm8318-201ENSMUST00000182954 872 ntBASIC13.63□□□□□ -0.23
Alx3O70137 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Alx3O70137 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Alx3O70137 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx3O70137 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx3O70137 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx3O70137 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms