Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm6745-201ENSMUST00000199216 526 ntBASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm6266-201ENSMUST00000203844 806 ntBASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm45668-201ENSMUST00000211271 493 ntBASIC14.41□□□□□ -0.1
Cacna1bO55017 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.4□□□□□ -0.1
Cacna1bO55017 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Gm13829-201ENSMUST00000119600 138 ntBASIC14.4□□□□□ -0.1
Cacna1bO55017 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cacna1bO55017 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.4□□□□□ -0.1
Cacna1bO55017 Gm18018-201ENSMUST00000198273 408 ntBASIC14.4□□□□□ -0.1
Cacna1bO55017 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cacna1bO55017 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1bO55017 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacna1bO55017 Gm15653-201ENSMUST00000119247 907 ntBASIC14.4□□□□□ -0.11
Cacna1bO55017 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.4□□□□□ -0.11
Cacna1bO55017 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.4□□□□□ -0.11
Cacna1bO55017 Gm3436-201ENSMUST00000179930 840 ntBASIC14.4□□□□□ -0.11
Cacna1bO55017 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.4□□□□□ -0.11
Cacna1bO55017 Gm6007-201ENSMUST00000208170 823 ntBASIC14.4□□□□□ -0.11
Cacna1bO55017 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cacna1bO55017 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1bO55017 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cacna1bO55017 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cacna1bO55017 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Gm12138-201ENSMUST00000122180 951 ntBASIC14.38□□□□□ -0.11
Cacna1bO55017 Gm8602-201ENSMUST00000184045 607 ntBASIC14.38□□□□□ -0.11
Cacna1bO55017 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.38□□□□□ -0.11
Cacna1bO55017 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms