Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Itgb3O54890 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Itgb3O54890 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Itgb3O54890 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Itgb3O54890 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Itgb3O54890 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Itgb3O54890 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Itgb3O54890 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Itgb3O54890 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Itgb3O54890 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.83■□□□□ 0.12
Itgb3O54890 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Gm15483-201ENSMUST00000120338 456 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Mir6990-201ENSMUST00000183724 91 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.82■□□□□ 0.12
Itgb3O54890 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Itgb3O54890 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Itgb3O54890 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Itgb3O54890 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.82■□□□□ 0.12
Itgb3O54890 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.82■□□□□ 0.12
Itgb3O54890 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Itgb3O54890 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Itgb3O54890 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Itgb3O54890 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Itgb3O54890 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Itgb3O54890 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.81■□□□□ 0.12
Itgb3O54890 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.81■□□□□ 0.12
Itgb3O54890 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
Itgb3O54890 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.81■□□□□ 0.12
Itgb3O54890 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.81■□□□□ 0.12
Itgb3O54890 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Itgb3O54890 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Gm8396-201ENSMUST00000057361 823 ntBASIC15.81■□□□□ 0.12
Itgb3O54890 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Itgb3O54890 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
Itgb3O54890 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Itgb3O54890 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Itgb3O54890 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Itgb3O54890 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Itgb3O54890 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.8■□□□□ 0.12
Itgb3O54890 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Itgb3O54890 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Itgb3O54890 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.8■□□□□ 0.12
Itgb3O54890 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.8■□□□□ 0.12
Itgb3O54890 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.8■□□□□ 0.12
Itgb3O54890 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.8■□□□□ 0.12
Itgb3O54890 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Itgb3O54890 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.8■□□□□ 0.12
Itgb3O54890 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Itgb3O54890 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Itgb3O54890 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Itgb3O54890 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms