Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm43767-201ENSMUST00000198933 381 ntBASIC16.83■□□□□ 0.28
Stx1aO35526 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.83■□□□□ 0.28
Stx1aO35526 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.83■□□□□ 0.28
Stx1aO35526 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Stx1aO35526 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Stx1aO35526 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Stx1aO35526 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Stx1aO35526 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Stx1aO35526 Gm6659-201ENSMUST00000174752 547 ntBASIC16.82■□□□□ 0.28
Stx1aO35526 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.82■□□□□ 0.28
Stx1aO35526 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Stx1aO35526 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stx1aO35526 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Stx1aO35526 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.81■□□□□ 0.28
Stx1aO35526 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.81■□□□□ 0.28
Stx1aO35526 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.81■□□□□ 0.28
Stx1aO35526 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Stx1aO35526 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Stx1aO35526 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Stx1aO35526 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stx1aO35526 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Stx1aO35526 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.8■□□□□ 0.28
Stx1aO35526 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.8■□□□□ 0.28
Stx1aO35526 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.8■□□□□ 0.28
Stx1aO35526 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.8■□□□□ 0.28
Stx1aO35526 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Stx1aO35526 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.8■□□□□ 0.28
Stx1aO35526 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Stx1aO35526 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Stx1aO35526 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.8■□□□□ 0.28
Stx1aO35526 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.8■□□□□ 0.28
Stx1aO35526 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
Stx1aO35526 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stx1aO35526 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Stx1aO35526 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Stx1aO35526 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms