Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Gm27867-201ENSMUST00000184778 125 ntBASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Gm8655-201ENSMUST00000221159 852 ntBASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Pcdh1F7BJK1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh1F7BJK1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh1F7BJK1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms