Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Gm14701-201ENSMUST00000117156 348 ntBASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Gm13464-201ENSMUST00000119418 935 ntBASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Gm8396-201ENSMUST00000057361 823 ntBASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tmf1B9EKI3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Gm11543-201ENSMUST00000120758 370 ntBASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tmf1B9EKI3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Gm18737-201ENSMUST00000173594 937 ntBASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Gm27920-201ENSMUST00000183953 96 ntBASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tmf1B9EKI3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gm2810-201ENSMUST00000118681 990 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gm43474-201ENSMUST00000196415 774 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gm43125-201ENSMUST00000201724 730 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tmf1B9EKI3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tmf1B9EKI3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms