Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Gm8749-201ENSMUST00000117737 331 ntBASIC17.45■□□□□ 0.38
Usp42B2RQC2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Gm45612-201ENSMUST00000211320 160 ntBASIC17.45■□□□□ 0.38
Usp42B2RQC2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp42B2RQC2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.44■□□□□ 0.38
Usp42B2RQC2 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.44■□□□□ 0.38
Usp42B2RQC2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.44■□□□□ 0.38
Usp42B2RQC2 Gm11594-201ENSMUST00000122313 162 ntBASIC17.44■□□□□ 0.38
Usp42B2RQC2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.44■□□□□ 0.38
Usp42B2RQC2 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.44■□□□□ 0.38
Usp42B2RQC2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.44■□□□□ 0.38
Usp42B2RQC2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Usp42B2RQC2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.43■□□□□ 0.38
Usp42B2RQC2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp42B2RQC2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp42B2RQC2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.42■□□□□ 0.38
Usp42B2RQC2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp42B2RQC2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms