Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Gm13559-201ENSMUST00000120476 863 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Gm18959-201ENSMUST00000208954 655 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Gm18101-201ENSMUST00000215769 548 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Celf4-206ENSMUST00000224553 1729 ntBASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm12887B1AVM1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Mir770-201ENSMUST00000103252 94 ntBASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gm19164-201ENSMUST00000210667 640 ntBASIC12.1□□□□□ -0.47
Gm12887B1AVM1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gm10812-201ENSMUST00000099864 546 ntBASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Gm12887B1AVM1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Gm7889-201ENSMUST00000185591 958 ntBASIC12.09□□□□□ -0.47
Gm12887B1AVM1 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms