Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.49■□□□□ 0.23
Krt28A6BLY7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.49■□□□□ 0.23
Krt28A6BLY7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Krt28A6BLY7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Gm11425-201ENSMUST00000119608 498 ntBASIC16.48■□□□□ 0.23
Krt28A6BLY7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Gm19220-201ENSMUST00000222682 803 ntBASIC16.48■□□□□ 0.23
Krt28A6BLY7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Gm9396-201ENSMUST00000076703 567 ntBASIC16.48■□□□□ 0.23
Krt28A6BLY7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.48■□□□□ 0.23
Krt28A6BLY7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Krt28A6BLY7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Krt28A6BLY7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Krt28A6BLY7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.47■□□□□ 0.23
Krt28A6BLY7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Gm45098-201ENSMUST00000207179 657 ntBASIC16.47■□□□□ 0.23
Krt28A6BLY7 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.47■□□□□ 0.23
Krt28A6BLY7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Krt28A6BLY7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.46■□□□□ 0.23
Krt28A6BLY7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Gm4984-201ENSMUST00000115987 360 ntBASIC16.46■□□□□ 0.23
Krt28A6BLY7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.46■□□□□ 0.23
Krt28A6BLY7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Krt28A6BLY7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms