Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm14722-201ENSMUST00000118943 689 ntBASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm18622-201ENSMUST00000219361 595 ntBASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm27867-201ENSMUST00000184778 125 ntBASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms