Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
BC053393A0A0B4J1F6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Rubie-203ENSMUST00000227803 2430 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm25406-201ENSMUST00000157599 105 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm25745-201ENSMUST00000174945 133 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm8825-201ENSMUST00000182565 998 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm4518-201ENSMUST00000182638 718 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
BC053393A0A0B4J1F6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.97□□□□□ -0.49
BC053393A0A0B4J1F6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms