Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm6376-201ENSMUST00000209407 580 ntBASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Grk6-207ENSMUST00000225925 2769 ntBASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm25990-201ENSMUST00000102440 86 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm12008-201ENSMUST00000117791 755 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm6089-201ENSMUST00000197666 938 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ighv1-47A0A0A6YY41 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms