Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-5A0A075B6B9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm10013-201ENSMUST00000106074 672 ntBASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm15794-201ENSMUST00000120182 631 ntBASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-5A0A075B6B9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms