Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav6-4A0A075B6B4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-4A0A075B6B4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav6-4A0A075B6B4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Gm12008-201ENSMUST00000117791 755 ntBASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms