Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Gm28033-201ENSMUST00000184224 96 ntBASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Gm6296-201ENSMUST00000222599 943 ntBASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-4A0A075B652 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-4A0A075B652 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gm4535-201ENSMUST00000182274 558 ntBASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gm8318-201ENSMUST00000182954 872 ntBASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gm27646-201ENSMUST00000183989 110 ntBASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gm10355-201ENSMUST00000097146 517 ntBASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms