Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm18195-201ENSMUST00000207604 706 ntBASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gm18246-201ENSMUST00000221023 728 ntBASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn9Q9Z0S7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms