Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Gm10517-202ENSMUST00000192970 758 ntBASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Gm4968-201ENSMUST00000071458 858 ntBASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco4Q9JIS3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Gm12382-201ENSMUST00000122005 922 ntBASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Rab3c-203ENSMUST00000224180 967 ntBASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Smco4Q9JIS3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smco4Q9JIS3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms