Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 AC160980.1-201ENSMUST00000224136 970 ntBASIC15□□□□□ -0.01
Trim42Q9D2H5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15□□□□□ -0.01
Trim42Q9D2H5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Gm37297-201ENSMUST00000192974 2384 ntBASIC15□□□□□ -0.01
Trim42Q9D2H5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim42Q9D2H5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.99□□□□□ -0.01
Trim42Q9D2H5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim42Q9D2H5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim42Q9D2H5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm8825-201ENSMUST00000182565 998 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm4518-201ENSMUST00000182638 718 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim42Q9D2H5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms