Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rita1Q9D1H0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rita1Q9D1H0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rita1Q9D1H0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rita1Q9D1H0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rita1Q9D1H0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rita1Q9D1H0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Gm6973-201ENSMUST00000117080 721 ntBASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rita1Q9D1H0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Efs-202ENSMUST00000227037 2540 ntBASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.76□□□□□ -0.21
Rita1Q9D1H0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Rprl2-201ENSMUST00000157150 290 ntBASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Rita1Q9D1H0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms