Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr1Q9CY50 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr1Q9CY50 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr1Q9CY50 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm8097-201ENSMUST00000117903 829 ntBASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm15372-201ENSMUST00000120729 834 ntBASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.26■□□□□ 0.19
Ssr1Q9CY50 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr1Q9CY50 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssr1Q9CY50 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms