Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Gm15920-201ENSMUST00000118998 402 ntBASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Gm26308-201ENSMUST00000157768 69 ntBASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retreg3Q9CQV4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Gm14822-201ENSMUST00000122247 291 ntBASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Gm17968-201ENSMUST00000194902 784 ntBASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retreg3Q9CQV4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Gm28877-201ENSMUST00000191349 604 ntBASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg3Q9CQV4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm38188-201ENSMUST00000192879 856 ntBASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm43767-201ENSMUST00000198933 381 ntBASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms