Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Gm21362-201ENSMUST00000194272 928 ntBASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf2Q9CQJ4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf2Q9CQJ4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gm17807-201ENSMUST00000186869 298 ntBASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf2Q9CQJ4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf2Q9CQJ4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms