Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTRAFQ9CQE8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTRAFQ9CQE8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTRAFQ9CQE8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTRAFQ9CQE8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms