Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Gm15358-201ENSMUST00000119249 520 ntBASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.15□□□□□ -0.15
Nkd1Q99MH6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Nkd1Q99MH6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.13□□□□□ -0.15
Nkd1Q99MH6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gm8318-201ENSMUST00000182954 872 ntBASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkd1Q99MH6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms