Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.25□□□□□ -0.13
Taf11Q99JX1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Taf11Q99JX1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.24□□□□□ -0.13
Taf11Q99JX1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Gm27275-201ENSMUST00000184318 272 ntBASIC14.24□□□□□ -0.13
Taf11Q99JX1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Taf11Q99JX1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Taf11Q99JX1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Taf11Q99JX1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Taf11Q99JX1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.22□□□□□ -0.13
Taf11Q99JX1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Taf11Q99JX1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms