Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Thap2-203ENSMUST00000218989 527 ntBASIC17.29■□□□□ 0.36
Smc1bQ920F6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Gm11424-201ENSMUST00000121929 829 ntBASIC17.28■□□□□ 0.36
Smc1bQ920F6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.28■□□□□ 0.36
Smc1bQ920F6 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.28■□□□□ 0.36
Smc1bQ920F6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc1bQ920F6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.27■□□□□ 0.36
Smc1bQ920F6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Gm7774-201ENSMUST00000200064 533 ntBASIC17.27■□□□□ 0.36
Smc1bQ920F6 Gm20553-201ENSMUST00000204205 844 ntBASIC17.27■□□□□ 0.36
Smc1bQ920F6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc1bQ920F6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc1bQ920F6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.26■□□□□ 0.35
Smc1bQ920F6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Gm19164-201ENSMUST00000210667 640 ntBASIC17.26■□□□□ 0.35
Smc1bQ920F6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms