Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Gm10175-201ENSMUST00000086013 645 ntBASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha9Q91Y11 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gm9385-201ENSMUST00000117563 472 ntBASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gm17271-201ENSMUST00000165535 355 ntBASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha9Q91Y11 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms