Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Gm23547-201ENSMUST00000158210 271 ntBASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Gm44430-201ENSMUST00000203376 995 ntBASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb3Q91XZ7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Gm30238-201ENSMUST00000195528 2603 ntBASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb3Q91XZ7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb3Q91XZ7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms