Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Gm5479-201ENSMUST00000160578 435 ntBASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Gm5866-201ENSMUST00000177881 973 ntBASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Mir7684-201ENSMUST00000183858 60 ntBASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhb5Q91XZ5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb5Q91XZ5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb5Q91XZ5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm13823-201ENSMUST00000119930 345 ntBASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm14767-201ENSMUST00000121559 586 ntBASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb5Q91XZ5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb5Q91XZ5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms