Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Gm28659-201ENSMUST00000188013 759 ntBASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga3Q91XY5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga3Q91XY5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhga3Q91XY5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms