Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx41Q91VN6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx41Q91VN6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx41Q91VN6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx41Q91VN6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ddx41Q91VN6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ddx41Q91VN6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Gm45747-201ENSMUST00000212203 999 ntBASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx41Q91VN6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Gm5177-201ENSMUST00000183092 997 ntBASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx41Q91VN6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Gm18246-201ENSMUST00000221023 728 ntBASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Ddx41Q91VN6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ddx41Q91VN6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms