Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Gm5643-201ENSMUST00000117081 966 ntBASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d2Q8VD57 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Odf3b-204ENSMUST00000227834 930 ntBASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d2Q8VD57 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sft2d2Q8VD57 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Trmt13-210ENSMUST00000198454 880 ntBASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d2Q8VD57 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.07□□□□□ -0.48
Sft2d2Q8VD57 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms