Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Gm9682-201ENSMUST00000197505 556 ntBASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm1Q8VC85 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Gm34391-201ENSMUST00000203706 907 ntBASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm1Q8VC85 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Gm43347-201ENSMUST00000200226 580 ntBASIC14.36□□□□□ -0.11
Lsm1Q8VC85 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Birc2-201ENSMUST00000054878 378 ntBASIC14.36□□□□□ -0.11
Lsm1Q8VC85 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms