Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc9Q8VC31 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc9Q8VC31 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc9Q8VC31 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc9Q8VC31 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc9Q8VC31 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc9Q8VC31 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc9Q8VC31 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Gm715-201ENSMUST00000117865 831 ntBASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Odf3b-204ENSMUST00000227834 930 ntBASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc9Q8VC31 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Gm27000-201ENSMUST00000182943 842 ntBASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ccdc9Q8VC31 Gm10728-201ENSMUST00000194292 1829 ntBASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc9Q8VC31 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Gm43061-201ENSMUST00000198850 2241 ntBASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms