Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Gm5479-201ENSMUST00000160578 435 ntBASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Gm27533-201ENSMUST00000183800 152 ntBASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Gm2423-201ENSMUST00000074863 733 ntBASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp7Q8R1T1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Chmp7Q8R1T1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Gm27680-201ENSMUST00000184192 160 ntBASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Gm44344-201ENSMUST00000200287 129 ntBASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp7Q8R1T1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Gm5745-201ENSMUST00000183748 313 ntBASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp7Q8R1T1 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Gm9719-201ENSMUST00000162765 543 ntBASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Prob1-201ENSMUST00000097619 3021 ntBASIC19.06■□□□□ 0.64
Chmp7Q8R1T1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms