Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zcchc9Q8R1J3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zcchc9Q8R1J3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zcchc9Q8R1J3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zcchc9Q8R1J3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zcchc9Q8R1J3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Zcchc9Q8R1J3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zcchc9Q8R1J3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zcchc9Q8R1J3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Gm16198-201ENSMUST00000118766 670 ntBASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Gm8318-201ENSMUST00000182954 872 ntBASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zcchc9Q8R1J3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Gm22175-201ENSMUST00000175007 78 ntBASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Gm7774-201ENSMUST00000200064 533 ntBASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms